PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97398.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family E2F/DP
Protein Properties Length: 459aa    MW: 50670.7 Da    PI: 4.6157
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.61.8e-27150215171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  PON97398.1 150 RYDSSLGLLTKKFINLIKQAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 215
                 6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MSGGGRAPSR PAPPPPPPVA SGGAAQIVPP LRRHLAFTST KPPFVPPDDY HRFSGDARRA  60
ADQEPEAIVV RSPLLKRKNA LENNEVDRHD WTSSPGYINV VNSPMQTPVS AKGGRTYNRS  120
KGSKGNKSAP QTPVSNAGSP SPLTPAGSCR YDSSLGLLTK KFINLIKQAE DGILDLNKAA  180
ETLEVQKRRI YDITNVLEGI GLIEKKLKNR IRWKGLDASR PGEVDGDISL LQAEVENLNL  240
EERRLDDQIR EMQERLRDLS EDETNQKWLF VTEEDIKGLP CFQNETLIAI KAPHGTTLEV  300
PDPDEAVDYP QRRYRIILRS TMGPIDVYLV SQFEEKFEDI NGAEPPANFP IASSLGSSEP  360
TATELVTVES TGKEIEPQEQ QDHQMCADIN ASQEFTGGMM KIVPSDVDND ADYWLISDAE  420
VSITDMWRTD SGVDWDGANM LHPDFGMPDV STPRPQTPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.10.0E2F/DP family protein