PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON93876.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family E2F/DP
Protein Properties Length: 919aa    MW: 102520 Da    PI: 6.141
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON93876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP80.81.2e-25622686170
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 
                 r+++sL+llt+kf++l++++e+++++ln  a+ L   +v  ++RRiYDi+NVLe+++liek++kn+irwk
  PON93876.1 622 RYDSSLGLLTRKFVNLIHEAEDRTLDLNRTADIL---EV--QKRRIYDITNVLEGIGLIEKTSKNHIRWK 686
                 6899******************************...99..****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 919 aa     Download sequence    
MSETNNQSGS VQNSRVTWEG CSVLLDINDG DRLVFARLSA AATLKIGNKN CSLQPLIGCA  60
FGSVFRVETG SEGPYLSRFS PSLEGNNIQE NNDSQFKDES KDNRALVDDN KAQSLTGEDI  120
DAMRRDGATG DEIVEALIAN SATFEKKTLF SQEKYRIKKQ KKYAPKVLVR RPFARRFLRA  180
DTLSLLLSMA NVSANSDVLV VDMVGGLLTG AVAERMGGTG YICSTYVGKT PYSMEIVRIF  240
NFGNDICKSI VRSSLDHLSS SHNGSLEQTD PSSTKGGLDD QTSSSVTTEE ICVASENEIS  300
NLLEDNISHG TRSSKSVKAG EKAPEEVIKL WKENGFSSLI VAAPDQDTWS LVRELLPLLS  360
NSAPFAIYHQ FLQPLATCMH NLQLGKMAIG LQISEPWLRE YQVLPSRTHP CMQMSAFGPG  420
GGGGPGLGRG PLLVEAEGGR RGFEPFFFFP PTLKNHSQSQ SQSLEGVSTI DLMAENPSSV  480
HSRSHSHSDG LSQFQFQPLL HFHSHSHSHS HSHYSPTPTT RELFPSTSSP TPHLHHHHHH  540
HSPLAPPDAF NRSRFSDFAK DSSQPETDSA FALTESNGKV VEARIRGRAA NSDSKVPTQS  600
KFGSQMLKVE CLTGLVPQNG CRYDSSLGLL TRKFVNLIHE AEDRTLDLNR TADILEVQKR  660
RIYDITNVLE GIGLIEKTSK NHIRWKRNDL LGPRELDDQI ARAKAEVESL YAEEYRLDEA  720
IRYQQNLLRN LEEDENSKKY LFFTEEDILT LPCFQNQTLI VIKAPKASFI EVPDPDEDIS  780
FPQRQYKMIV RSVRGPIDSF LLSKYQGQNE DITTKRTTYE DSPPRNGDYC VMEDEGLSSD  840
HPDDQKITFE SLSSLGPKAS GTQKIIPSEL GVNDDYWFGS DPEVSGYSFL FWKLTNLDYA  900
RLIKFKHWQL QRFDFISLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.22e-87E2F/DP family protein