PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76016.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family E2F/DP
Protein Properties Length: 375aa    MW: 42393.8 Da    PI: 8.5999
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP68.21.1e-211883171
     E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                rkeksL++l+++flkl+++   g++ l+++a++L    v  +rRR YD++N+Le ++++++k+kn+++wkg
  PON76016.1 18 RKEKSLGVLCSNFLKLYNRDGVGAIGLDDAASQL---GV--ERRRMYDVVNILEIVGVVSRKAKNQYTWKG 83
                79*****************999************...**..****************************98 PP

2E2F_TDP67.22e-21142220270
     E2F_TDP   2 keksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwk 70 
                 ++ksL lltq+f+kl+ +s+++ + l+++ak L  +       ++k+RR+YDi+NVL+++nliek     + k+++rw 
  PON76016.1 142 RDKSLSLLTQNFIKLFLCSDADLILLDNAAKGLPGDaddatALRTKVRRLYDIANVLSSINLIEKirhpdSGKPAYRWL 220
                 79*******************************777****99999**********************99999******6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MSSFLSLESE TRPSVYCRKE KSLGVLCSNF LKLYNRDGVG AIGLDDAASQ LGVERRRMYD  60
VVNILEIVGV VSRKAKNQYT WKGLGEIPRT LEQLKEEGLR ENFNSSLCCS RISNDNEHRG  120
LLSLNTGEED HSSVSSKSKN KRDKSLSLLT QNFIKLFLCS DADLILLDNA AKGLPGDADD  180
ATALRTKVRR LYDIANVLSS INLIEKIRHP DSGKPAYRWL CWSGKPKNEI DTSDINDSNE  240
PKKRAFGTDV TNYNFKRKRE VTAVDCKSNQ ETGRQTNTKS TELEQHEYDG EEVKQHPKHA  300
SKGIVFGPFA PVSMSKVGDA ANKKMRQDQN WESLASSYRP QYRNQALCDL FSHYMEAWKS  360
WFVDAVGTQK MQQIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242259KKRAFGTDVTNYNFKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01330.11e-111E2F/DP family protein