PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON62956.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family E2F/DP
Protein Properties Length: 463aa    MW: 50967.9 Da    PI: 4.5863
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON62956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.61.9e-27142207171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  PON62956.1 142 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207
                 6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MSGSRAPNPS AQPSEQITHP LKPSQLPFSS MKPPFSVPGD YHRFGPDPRQ LTDHEADAII  60
VKPPLKRKGD TADYEAESSD RAAGPKIVEV VNSSLQTPVS IKAGKATKTL RLTKCSKARP  120
QTPVSTVGSP SGPNLTPAGP CRYDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGDADENY ASLQAEVENL SIEEHRVDEQ  240
IREMQERLRD LSEDENNQKW LFVTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAVD  300
YPQRRYRVVL RSTMGPIDVY LVSQFEEKFE EINGVQVPAN FPSSSGVNEN PATTIGTENR  360
GKDIEVQGQH DQGISVDPNA PQDSVGGIMK IVPSDVDSDA DYWLLTDAAD VSITDMWRTE  420
PEVEWSNFGL HEDYAMVNVS TPRPESPVSN PTEVPSTANP TGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.21e-155E2F/DP family protein