PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045780.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-PHD
Protein Properties Length: 833aa    MW: 91163.1 Da    PI: 6.25
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045780.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.13.4e-095926311352
                       HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
          Homeobox  13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                       + L+++Fek++yps+ ++e L ++lgLt  q++ WF   R
  TRIDC3BG045780.4 592 QKLKAYFEKEPYPSRPAKESLGQELGLTFHQITRWFSSTR 631
                       689*********************************8776 PP

2PHD42.12e-14241296151
                       SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
               PHD   1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                       +C++C +   + +++++lCdg C++ fH+kCl+++l  e++p+g   wlC+ C++k
  TRIDC3BG045780.4 241 FCAICASkhVTLKNDIILCDGvCDRGFHQKCLNPPLLAEDIPQGdeGWLCPACDCK 296
                       7******65555********77*********************999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 833 aa     Download sequence    
MGKTSASGVV QENEKVGNGS PSSPTKGKRG RKGSQIISNK KYPLRSAHSS ARVLRSTSKD  60
KSKTPNEPVS PLRSAHSSPR VLRSTPKNKS KTPKKQVNSL RSAHSSARVL SSTLKKKVPN  120
EPVNNSTAAQ PAARKRKRGR PSNAASPKNE CIKIRQRVRY ILNRMNYEQS FIQAYAGEGW  180
KGQSLEKIRP EKELERAKAE ILRCKLRIRE AFRNMDSLLL EGKLDESLFD SEGEISSEDI  240
FCAICASKHV TLKNDIILCD GVCDRGFHQK CLNPPLLAED IPQGDEGWLC PACDCKLDCI  300
DLLNELQGST LAIHDSWEKV FPESTSNGLN QIGASDLPSD DSEEDYDPTL AEGDTVDEDK  360
SSAEDGDEGS DSDDLDFITS SDESEPSKKK KSESKNKNTV NDLALPSDDS EDDDFDPEGP  420
NSSEDQKTKT NSDESDFTSD SDDFCAEISK SSGKDKVSAP SFSDQTNGVD IMEAELEQDS  480
VLPASNRRQV GTLDYKKLYD EAYGKETTDS SDEKEWSGHS PNGNPEDSDT DSFAGPLKPA  540
KTRRARGGRQ NNERTAQSER HSGSVSEQHP EVLSNGTSST ARKKGYGPIV NQKLKAYFEK  600
EPYPSRPAKE SLGQELGLTF HQITRWFSST RHYSRVTATK KGKRSENYTA ENNDGIAADS  660
IQQREPNGSV LGKPNVDRNG IISEERMAQK NLDEGEKEDT PFRQRISCEQ TLDGTPANKH  720
NTANSREVDP PIGAPGGNQQ SDTSRNAEDT PLGQDIGCEQ TVAAINQNCT IGSSNVGSPK  780
GVPGGNKRLN NSPSVGSPRR GSAEKNIPGL EHVDEARRKA ILRELRKMKA AGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115137KKKVPNEPVNNSTAAQPAARKRK
2133139ARKRKRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.14e-82HB-PHD family protein