PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG045780.16
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-PHD
Protein Properties Length: 619aa    MW: 67343.8 Da    PI: 4.3627
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG045780.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.3e-093784171352
                        HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
           Homeobox  13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                        + L+++Fek++yps+ ++e L ++lgLt  q++ WF   R
  TRIDC3BG045780.16 378 QKLKAYFEKEPYPSRPAKESLGQELGLTFHQITRWFSSTR 417
                        68**********************************8776 PP

2PHD42.61.4e-142782151
                       SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
                PHD  1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51
                       +C++C +   + +++++lCdg C++ fH+kCl+++l  e++p+g   wlC+ C++k
  TRIDC3BG045780.16 27 FCAICASkhVTLKNDIILCDGvCDRGFHQKCLNPPLLAEDIPQGdeGWLCPACDCK 82
                       7******65555********77*********************999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    
MDSLLLEGKL DESLFDSEGE ISSEDIFCAI CASKHVTLKN DIILCDGVCD RGFHQKCLNP  60
PLLAEDIPQG DEGWLCPACD CKLDCIDLLN ELQGSTLAIH DSWEKVFPES TSNGLNQIGA  120
SDLPSDDSEE DYDPTLAEGD TVDEDKSSAE DGDEGSDSDD LDFITSSDES EPSKKKKSES  180
KNKNTVNDLA LPSDDSEDDD FDPEGPNSSE DQKTKTNSDE SDFTSDSDDF CAEISKSSGK  240
DKVSAPSFSD QTNGVDIMEA ELEQDSVLPA SNRRQVGTLD YKKLYDEAYG KETTDSSDEK  300
EWSGHSPNGN PEDSDTDSFA GPLKPAKTRR ARGGRQNNER TAQSERHSGS VSEQHPEVLS  360
NGTSSTARKK GYGPIVNQKL KAYFEKEPYP SRPAKESLGQ ELGLTFHQIT RWFSSTRHYS  420
RVTATKKGKR SENYTAENND GIAADSIQQR EPNGSVLGKP NVDRNGIISE ERMAQKNLDE  480
GEKEDTPFRQ RISCEQTLDG TPANKHNTAN SREVDPPIGA PGGNQQSDTS RNAEDTPLGQ  540
DIGCEQTVAA INQNCTIGSS NVGSPKGVPG GNKRLNNSPS VGSPRRGSAE KNIPGLEHVD  600
EARRKAILRE LRKMKAAGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.14e-47HB-PHD family protein