PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90510.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family TALE
Protein Properties Length: 404aa    MW: 45813.5 Da    PI: 5.7929
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.88.9e-09326382255
                 T--SS--HHHHHHHHHHHH...HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFe...knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                 +kR ++ k+  ++L e  +   k +yp++ ++  LA+++gL+++q+ +WF N+R ++
  OWM90510.1 326 KKRGKLPKQARDILLEWWNvhyKWPYPTEVDKVALAESTGLDQKQINNWFINQRKRH 382
                 5666666666666666655444689*****************************885 PP

2ELK30.58e-11305323422
         ELK   4 hqLlrKYsgyLgsLkqEFs 22 
                 + L+rKYsgy++ Lk+EFs
  OWM90510.1 305 DKLMRKYSGYISALKHEFS 323
                 78****************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MMEEGMYEIQ YGGTCYGDEP PNHHHHHQQQ PPPLIADGGY NHHPDHREGF PAGSVVYGPG  60
GGPWMQLQPG SSSAAVSDAA SGMVLEAGEE DSLSVAMARA KIAAHPLYPK LLQAYIDCQK  120
VGAPAEVADV LERIRRENED YGTTDNHCLG ADPELDEFME AYHDTLMRYK TDLSRPFEEA  180
TSFLKKIENQ LNTLCSGSST NCASGRFRIG RFNLVMYTML ARGFMPDRWN PSHIIWILVY  240
LLAFKEHACC FTEGSSVADI KLPVGTDDNK EYCCTGDSSE DDDLSGGEID TSECYRTRED  300
RELMDKLMRK YSGYISALKH EFSKKKKRGK LPKQARDILL EWWNVHYKWP YPTEVDKVAL  360
AESTGLDQKQ INNWFINQRK RHWKPSDHMH FSLMESLYGP FIPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324331KKKKRGKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.14e-44TALE family protein