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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
Previous version:
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v4.0
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM71970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | TALE | ||||||||
Protein Properties | Length: 294aa MW: 32877.1 Da PI: 6.8478 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.6 | 8.8e-08 | 242 | 275 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + OWM71970.1 242 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 275 469*****************************87 PP | |||||||
2 | ELK | 25.1 | 4e-09 | 196 | 217 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ OWM71970.1 196 ELKIELKQGFRSKIEDVREEIL 217 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MMGGGRGGGG GIGGLAAGEG TVSAADLQKL KAEIATHPLY EQLMSAHVAC LREATPIDQL 60 PLIDAQLAQA HHLLRSYAAA AQQQHSLSPH DRQELDNFLA QYLIVLCSFK EQLQQHVRVH 120 AVEAVMACRE IENNLHALTG ATLGEGTGAT MSDDEDDLQM DYSLDQSGAE GHDMMGFGPL 180 LPTESERSLM ERVRQELKIE LKQGFRSKIE DVREEILRKR RAGKLPGDTT SVLKNWWQQH 240 SKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHNN SSHSVTSLKS KRKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 11 | GGGRGGGGG |
2 | 4 | 12 | GGGRGGGGG |
3 | 273 | 294 | RKRNWHNNSSHSVTSLKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62990.1 | 1e-158 | TALE family protein |