PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM71970.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 294aa MW: 32877.1 Da PI: 6.8478

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM71970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.8e-08	242	275	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + OWM71970.1 242 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 275 469*****************************87 PP
2	ELK	25.1	4e-09	196	217	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ OWM71970.1 196 ELKIELKQGFRSKIEDVREEIL 217 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MMGGGRGGGG GIGGLAAGEG TVSAADLQKL KAEIATHPLY EQLMSAHVAC LREATPIDQL 60 PLIDAQLAQA HHLLRSYAAA AQQQHSLSPH DRQELDNFLA QYLIVLCSFK EQLQQHVRVH 120 AVEAVMACRE IENNLHALTG ATLGEGTGAT MSDDEDDLQM DYSLDQSGAE GHDMMGFGPL 180 LPTESERSLM ERVRQELKIE LKQGFRSKIE DVREEILRKR RAGKLPGDTT SVLKNWWQQH 240 SKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHNN SSHSVTSLKS KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	11	GGGRGGGGG
2	4	12	GGGRGGGGG
3	273	294	RKRNWHNNSSHSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-158	TALE family protein