PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g981520.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 216aa    MW: 24522.9 Da    PI: 9.5933
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g981520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP74.31.3e-2383163171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                       r+eks+ lltq+f+kl+ +s e++++l++v+k L+ +      +++k+RRiYDi+NVL+++nliek     ++k +++w g
  Pd.00g981520.m01  83 RREKSMALLTQNFVKLFVCSIEEMISLDDVTKLLLGDvqsapAMRTKVRRIYDIANVLSSMNLIEKthtadTRKLAFKWLG 163
                       689***************************************************************999999999999987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MAYLFLHQPK NQYYWKGFGA IRNALQELRE EGLRENCINF VANDNAKVSD DKDDEERCGS  60
QLNDKSNPTV NPQPPADQKT DNRREKSMAL LTQNFVKLFV CSIEEMISLD DVTKLLLGDV  120
QSAPAMRTKV RRIYDIANVL SSMNLIEKTH TADTRKLAFK WLGLRGKEEN LVPSESRKRA  180
LGTYITNVIS KRGKMESSIG GKLDAQKQRQ PTQISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.19e-62E2F/DP family protein