PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g883050.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 216aa    MW: 24375.4 Da    PI: 8.0421
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g883050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP71.87.5e-2383163171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                       r+eksL lltq+f+kl+ +s+e++++l++v++ L+ +      +++k+R iYDi+NVL+++nliek     ++k +++w g
  Pd.00g883050.m01  83 RREKSLALLTQNFVKLFVCSTEEMISLDDVTELLLGDaqsasAMRTKVRGIYDIANVLSSMNLIEKthtadTRKLAFKWLG 163
                       689***************************************************************999999999999987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSYLFLHQPK NQYYWKGFGA IRNALQELRE EGLRENCINF VASDDAKVSD DKDDEERCGS  60
QLNDKSNPTV NPQPPADQKT DNRREKSLAL LTQNFVKLFV CSTEEMISLD DVTELLLGDA  120
QSASAMRTKV RGIYDIANVL SSMNLIEKTH TADTRKLAFK WLGLRGKEEN LVPNESRKRA  180
FGTDITNVIS KRSKMDSSIG GKLDAQKQRQ PTQISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.13e-60E2F/DP family protein