PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g810280.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 358aa    MW: 40101.1 Da    PI: 9.3807
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g810280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP71.78.5e-232085171
           E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                      rk+ksL+ll+++fl l+++   + + l+++a++L    v  +rRRiYDi+NVLe+++++++k+kn+++wkg
  Pd.00g810280.m01 20 RKQKSLGLLCSNFLGLYNRDGVTSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLARKAKNQYSWKG 85
                      79*****************999************...**..****************************98 PP

2E2F_TDP81.66.8e-26151231171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                       r+eksL lltq+f+kl+ +s+e++++l++vak L+ +      +++k+RRiYDi+NVL+++nliek     ++k++++w g
  Pd.00g810280.m01 151 RREKSLALLTQNFVKLFVCSTEEMISLDDVAKLLLGDaqsasAMRTKVRRIYDIANVLSSMNLIEKthtpdTRKPAFKWLG 231
                       689*******************************************************************99*******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAAPAAPPSG PSTRKHGYSR KQKSLGLLCS NFLGLYNRDG VTSIGLDDAA SRLGVERRRI  60
YDIVNVLESV GVLARKAKNQ YSWKGFGAIP NALQELREEG LRENCINFAG NDDAKVSDDE  120
DDEERCGSQP NDKSNPTVNP QPPADQKPDN RREKSLALLT QNFVKLFVCS TEEMISLDDV  180
AKLLLGDAQS ASAMRTKVRR IYDIANVLSS MNLIEKTHTP DTRKPAFKWL GLRGKEENLV  240
PNESRKRAFG TDITNVIPKR GKLESSIGGE LDAQKQRQHD LEDSKDGSKS YQFGPFAPVT  300
IARPGNSNMR RVHDWEKLTS TYRPQYQNQA LKDLFSHYME AWKSWYSEVA GKNPIRIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-138E2F/DP family protein