PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g690230.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 670aa    MW: 74507.6 Da    PI: 5.0789
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g690230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP24.73.9e-08561595138
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 
                       r ++sL+llt+kf++l++++e+gi++ln++a++L   +
  Pd.00g690230.m01 561 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 595
                       6789*****************************9...3 PP

Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MLGWMKSLNP EINGVTGSES NLISTSDPNS TQVFFGDRSS YVDPNPGHSI QAIYEQVFGE  60
PWTEASASKT LPPKMNGFAQ NAEKTQTGLA ETVMNGFKPE NVPVTAELVR EFAVCDRWFA  120
SIPSSTQPNR QFVHSATSHG LTSNDTQKLV EGLPQKTIFQ SLDEEDLSFG IYFQSFPSTL  180
LYRKLRKLKY IDNFHAFDLQ FKKHCEEGKL PNYVVVEQRF FDVLSFPAND DHPSHDVSEG  240
QKFIKEVYEA LRASPQWNEM LFVIIYDEHG GFYDHVPTPV TDVPSPDDIV GPEPYNFKFD  300
RLGVRVPAIL ISPWIERGTV LHGPSGPYPS SEFEHSSIPA TVKKIFNLKE FLTKRDAWAG  360
TFEGVLSRTS PRTDCPVTLG EPMKLRETAA KEGGNLSDFQ EELVQLAAAL NGDHRKDIYP  420
NKLVENISVV EALKYVEAAF EKFSDACEKA RESGADESEI VVCETSPSPP HHKSFAQRIF  480
SCLLKRKSDA ADYEAESSDR TAAPGYTEAV TSPLQTPVSS KVGKANKTSR LTKCSRSGPQ  540
TPASNVGSPS GPNLTPAGPC RFDSSLGLLT KKFINLIKHA EDGILDLNNA ADTLEVTTFL  600
SVVMFEKQDG VVLMATTGNL KQIDEALQRP GRMDRDEDNK EKETARFAQL WNKIISSFRE  660
EDLISDRFFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.33e-29E2F/DP family protein