PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g686770.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 783aa    MW: 88189.5 Da    PI: 8.5517
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g686770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP83.81.4e-26158222170
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 
                       r+++sL+llt+kf++l++++++++++ln+ a+ L   +v  ++RRiYDi+NVLe++nliek++kn+irwk
  Pd.00g686770.m01 158 RYDSSLGLLTKKFVSLIQEAKDRTLDLNKTAEVL---EV--QKRRIYDITNVLEGINLIEKTSKNHIRWK 222
                       6899******************************...99..****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 783 aa     Download sequence    
MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPSYLLPSL PSSQRLLPHS FPAFAPSIDS  60
GHHRLSDSAF ASHADAHSAF AKLGLRPKKE IDDVAQIGGH EAAAGPSKVL HDLSLSIPQS  120
CTGRKHNPKS KVPKHTKAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR  180
TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ  240
DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA  300
PQASYIEVID PDDEEDTCFP QKRFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVVS  360
SSWNSSDYSR VEDGGPSSYH QGNKKDSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS  420
EPERIRTGPR ANDLSFKTIL GRVVQHWPMD IDRSVNGNQS LPPPTSLRFV DAFRRRRFRP  480
TAIPEHRQEV YKMIGSFLTR GLVMVLGYAY PAYECYKTVE KNKPEIEQLR FWCQYWILVA  540
VLTVCERIGD AFVSWVPMYS EAKLLFIIYL WFPKTKGTTY VYDSFFRPYL AKHENEIDRN  600
LLELRTRAGD IAVVYWQRAA SYGQTRIFDI LQYVAAQSTP RPRPAQPQQG VRARQPPAAR  660
QPPPSPNQQP AAKTQLQPEE LPSPTSSTTS SKDQREIAEA LAPSTKPKAA PQAAVSNTQK  720
ATAAASESAS QSVPAEEVEP MQTEAVASSS STEDTNPPPK ETVMEDSIRF TRARLRKARS  780
AGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.28e-76E2F/DP family protein