PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g515140.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 464aa    MW: 51284.3 Da    PI: 4.5409
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g515140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP85.93.1e-27142207171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r ++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  Pd.00g515140.m01 142 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207
                       6789******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY  60
VKPSLKRKSD AADYEAESSD RTAAPGYTEA VTSPLQTPVS SKVGKANKTS RLTKCSRSGP  120
QTPASNVGSP SGANLTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNN AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRTGDVDENY PSLQAQVENL SDEERRLDQQ  240
IREMQERLRD LSEDESNKKW LFVTEEDIKG LPCLQNETLI AIKAPHGTTL EVPDPDEAVD  300
YPQRRYRMVL RSTMGPIDVY LVSQFEEKFE EINGVEVPTD IPSSSGVNEN PATTMVTENR  360
GKDVEIQGPD DHRMCADPTA SQDIMSGMMK IVPSDVDSDA DYWLLSDDAD ISITDMWRTE  420
PGVVWNELGA IDEDYPMVNV STPRPQTPPS SSTQVPATAN RTKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.21e-154E2F/DP family protein