PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g144570.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 432aa    MW: 48474.2 Da    PI: 6.5114
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g144570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP84.96e-27158222170
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 
                       r+++sL+llt+kf++l++++++++++ln+ a+ L   +v  ++RRiYDi+NVLe++nliek++kn+irwk
  Pd.00g144570.m01 158 RYDSSLGLLTKKFVSLIQEAKDRTLDLNKTAEVL---EV--QKRRIYDITNVLEGINLIEKTSKNHIRWK 222
                       6899******************************...99..****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPNYLLPSL PSSQRLLPHS FPAFAPSIDS  60
GHHRLSDSAF ASHADAHSAF AKLALRPKKE IDDAAQIGGH EAAAGPSKVL HDLSLSIPQS  120
CTGRKHNPKS KVPKHTKAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR  180
TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ  240
DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA  300
PQASYIEVID PDDEEDTCFP QKQFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVGS  360
SSWNSSDYSR VEDGGPSSYH QGNKKNSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS  420
EPEVSLTDLW AN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.11e-86E2F/DP family protein