PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g103520.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 342aa    MW: 37906.4 Da    PI: 5.8599
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g103520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.31.1e-2786168271
           E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  Pd.00g103520.m01  86 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpsngvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 168
                       689********...*****999*******************************************************.*******98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MGTRPQQPSR ERADVDDDMA GQSVSMSGSV GSPSSRSEQT MATPAGDTNF LRLNHPDVHG  60
DDAGSQGAVG SKKKKRGQRA VAGDKSGRGL RQFSMKVCEK VESKGRTTYN EVADELVAEF  120
ADPSNGVTSP DQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSLNDIEEL  180
KTERLGLRNR IEKKASYLQE LEEQYVGLQN LIQQNEQLYH SGDALSGGVA LPFILVQTRP  240
HATVEVEISE DMQLVHFDFN STPFELHDDN YVLKAMKFCE RPQADDGTQN LTADGGEGCS  300
MSSMYQPQIP LPSMLNTPVR PPTSPPIPGI LKARVKHEHH GQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-150E2F/DP family protein