PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g051130.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 215aa    MW: 23180.1 Da    PI: 9.5712
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g051130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP26.97.9e-09150184138
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 
                       r ++sL+llt+kf++l++++e+gi++ln++a++L   +
  Pd.00g051130.m01 150 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 184
                       6789*****************************9...3 PP

Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MRTPSPDNKR PLSPELSVPP QPNSAATART PFQWHHQQSG GGNMAFNQAH RNMFMSHPYG  60
ISSYGLKMQG QELKRKSDAA DYEAESSDRT AAPGYTEAVT SPLQTPVSSK VGKANKTSRL  120
TKCSRSGPQT PASNVGSPSG PNLTPAGPCR FDSSLGLLTK KFINLIKHAE DGILDLNNAA  180
DTLEVTTFLS VVMYSMSRTL NYKCSLYVGA KEADL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.22e-32E2F/DP family protein