PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G03230.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family E2F/DP
Protein Properties Length: 446aa    MW: 48581.5 Da    PI: 4.4092
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G03230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP83.32e-26130195171
          E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      r+++sL+llt+kfl+ll+ ++ giv+ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  ONIVA12G03230.1 130 RYDSSLGLLTKKFLNLLKGAPGGIVDLNNAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNNIRWKG 195
                      6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MAAAGAGSSE VAARVLLQRY QPFAPPPGEY HQFGSGGAAA AGDMTEAVLI RTPLKRKHDR  60
EENEAAESND WMMSPGYTNP AGSPVPTPLS GKGSKAFAKS KAAKGQKSCP QTPLCASSPG  120
NPVTPVGGCR YDSSLGLLTK KFLNLLKGAP GGIVDLNNAA ETLEVQKRRI YDITNVLEGI  180
GLIEKKLKNN IRWKGIDDSR PGEVSDDMSI LQADIEALSL QEHSVDQQIS EMRDKLRGLT  240
EDENNQKWLY VTEDDIKSLP CFQNQTLIAI KAPHGTTLEV PDPDEVNDYP QRRYRIVLRS  300
TMGPIDVYLV SQFEEMSGME TPPRTVQPVS MDSLENPRTP LAAEPNKAAE SQPNIQDGLL  360
MPSDAPSSSQ DIGGMMKIVP SELDTDADYW LLSDAGVSIT DMWKTAPEVE WEGIEKFNAE  420
DFLEVSTPRQ QDKPSSDIMD GDSCIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-109E2F/DP family protein