PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G05260.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family E2F/DP
Protein Properties Length: 471aa    MW: 51140.4 Da    PI: 4.8201
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G05260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP82.73e-26193258171
          E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      r+++sL+llt+kf++lle +e+g+++ln++a++L   +v  ++RRiYDi+NVLe+++liek+ kn irwkg
  ONIVA10G05260.1 193 RYDSSLGLLTKKFINLLEGAEDGTLDLNKAAETL---EV--QKRRIYDITNVLEGVDLIEKTLKNMIRWKG 258
                      6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MDGSAAIPPR PAPTPPAPAP APPQVFLRRS VLPPPPAPHH APPPPGAHVH YFRAASPIPI  60
FRAAASSRPP RPPPPSTTTA PPPPAAPAVT PARPPPQQPA VAVAAPPPAT TTATATEEVA  120
APATGNPMAN AADNEEKNER ETVQSEVAKG ETVQGPDKEC TTGAVKGIKR PRKPKGFKKG  180
DAGPSLFSPN NCRYDSSLGL LTKKFINLLE GAEDGTLDLN KAAETLEVQK RRIYDITNVL  240
EGVDLIEKTL KNMIRWKGFD MSKPKERERQ ISALKEEIES LYDEESRLDD EIMEAQEKLN  300
ALRVDEDRRK LLYVSKEDIN AIPRFQGSTL IAVNAPRGTY IEVPDPNLDM DIYKDLDNQE  360
KHYQIVFRSA MGPVDCFLIS NHQETFNADQ QMADNLDAAV TSGSSQAPQQ MDYVQASEIG  420
ESNGVREHTS EPSKRDDPVP GIVKIVPSDD IAADYWLSSD ADVSMTDTWG T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.38e-81E2F/DP family protein