PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G05110.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family E2F/DP
Protein Properties Length: 419aa    MW: 46239.4 Da    PI: 9.517
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G05110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP72.93.6e-2354119171
          E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      rk+ksL+ll+++f++l+++ + + + l+++a++L    v  +rRRiYDi+NVLe+++++ +k+kn+++w+g
  ONIVA06G05110.1  54 RKQKSLGLLCSNFVALYNRDDVESIGLDDAARRL---GV--ERRRIYDIVNVLESVGILVRKAKNRYSWIG 119
                      79*****************999************...**..****************************98 PP

2E2F_TDP75.94.1e-24177257171
          E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                      rkeksL+lltq+f+kl+ + e ++++l+e+ak L+ e     ++++k+RR+YDi+NVL++ln i+k     ++k+++rw g
  ONIVA06G05110.1 177 RKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEghaenSMRTKVRRLYDIANVLSSLNFIDKiqqadSRKPAFRWLG 257
                      79********************************************************************99*******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MATAAVMAAV PSSSPADAAE AVVMTEAVPS LPQRQQPVFV EGRGGKLRDH AYSRKQKSLG  60
LLCSNFVALY NRDDVESIGL DDAARRLGVE RRRIYDIVNV LESVGILVRK AKNRYSWIGF  120
GGVPMALREL KMSDDEDEDK MGDADGDTES EKLSQPVDNP SDNKPGAPRC RLRSDHRKEK  180
SLGLLTQNFV KLFLTMEVDT ISLDEAAKLL LGEGHAENSM RTKVRRLYDI ANVLSSLNFI  240
DKIQQADSRK PAFRWLGSAG KPKAENGVTI AVPPPGKTIS NKRAFGTELT NIDINRSRLD  300
STIPKKAKLT QSGGEILKNC KLSVQKQLGQ GSKGGFVYGP FHPAGARKQE LDNGNKGHTD  360
NVQNWESLAA SFRPQYQNQA LGDLFAHYVE AWKSWYSEFA QGSSMMQQHF GMPVINQFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-102E2F/DP family protein