PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G03810.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family E2F/DP
Protein Properties Length: 444aa    MW: 48429.9 Da    PI: 10.6409
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G03810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP65.76.2e-21219279371
          E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +++Lr++++k   ++ek+e+ g++t+ne  ++    d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  ONIVA03G03810.1 219 GRGLRQFSMK---VCEKVESkGRTTYNE--QQY---DEKNIRRRVYDALNVLMAMEIISK-DKKEIQWKG 279
                      689*******...*****999******9..566...8899********************.*******98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MRPPGTALGF GLISGAGSRR VTEPKPPNFI RKKIKIKRKK QKRKEEKRSS SPRLCPPSRR  60
FLISFSPSNL PPLCRFRVSA LQLLPNSGPR FARSRPPMVS GVAHRPDDDG GRAASTFQRP  120
PQPAGARPSL ATPPPSGGAQ SASTSGGSAG SPSSRSEQHV PAAAGMAAGA AAASTPISEN  180
TFLRLNDLDI HGDDAPSSQA PTSKKKKRGA RAVGPDKGGR GLRQFSMKVC EKVESKGRTT  240
YNEQQYDEKN IRRRVYDALN VLMAMEIISK DKKEIQWKGL PRTSINDIED LQTELVGLKS  300
RIEKKNTYLQ ELQDQLIQRN EQLYGSGNIP SGGVALPFIL VQTRPHATVE VEISEDMQLV  360
HFDFNSTPFE LHDDSFVLKA MSSCGEEQID GIHDLISNGG ESSSMPNIYR QQVQQPARST  420
NGTARLPSSP PIPGILKGRV KHEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13144RKKIKIKRKKQKRK
23748KRKKQKRKEEKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-112E2F/DP family protein