PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105354.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 461aa    MW: 51052.9 Da    PI: 4.5024
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.12.6e-27138203171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  XP_028105354.1 138 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 203
                     6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK  60
SPRKSETADL VAESSDWNPS TGYVEAVGSP LQTPVSGKGG KAQKAPRMAK SNRSGSQTPV  120
SNVGSPSGNN LTPIGPCRYD SSLGLLTKKF INLIKHAEDG ILDLNKAAET LEVQKRRIYD  180
ITNVLEGIGL IEKKLKNRIQ WKGVDVSRPG ETDENAVTIQ AEVENLSLEE RRLDEQIREM  240
QERLRELSEN ENNQKWLFVT EDDIKGLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR  300
RYRVVLRSTM GPVDVYLVSQ FEEKFEEINN GVGASPSIPS TSGLNENTSA PLLTEESNQN  360
EIEMQGQEEA HRTCSDINAT PDFASGIMKI VPEVESDADY WLLPDADVSI TDLWGTESVV  420
EWNELGTLHD DFEMANVITP RPQTPPSSTT EVPSAANTTG R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.21e-148E2F/DP family protein