PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028105354.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 461aa MW: 51052.9 Da PI: 4.5024

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028105354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.1	2.6e-27	138	203	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_028105354.1 138 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 203 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK 60 SPRKSETADL VAESSDWNPS TGYVEAVGSP LQTPVSGKGG KAQKAPRMAK SNRSGSQTPV 120 SNVGSPSGNN LTPIGPCRYD SSLGLLTKKF INLIKHAEDG ILDLNKAAET LEVQKRRIYD 180 ITNVLEGIGL IEKKLKNRIQ WKGVDVSRPG ETDENAVTIQ AEVENLSLEE RRLDEQIREM 240 QERLRELSEN ENNQKWLFVT EDDIKGLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR 300 RYRVVLRSTM GPVDVYLVSQ FEEKFEEINN GVGASPSIPS TSGLNENTSA PLLTEESNQN 360 EIEMQGQEEA HRTCSDINAT PDFASGIMKI VPEVESDADY WLLPDADVSI TDLWGTESVV 420 EWNELGTLHD DFEMANVITP RPQTPPSSTT EVPSAANTTG R

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK  60
SPRKSETADL VAESSDWNPS TGYVEAVGSP LQTPVSGKGG KAQKAPRMAK SNRSGSQTPV  120
SNVGSPSGNN LTPIGPCRYD SSLGLLTKKF INLIKHAEDG ILDLNKAAET LEVQKRRIYD  180
ITNVLEGIGL IEKKLKNRIQ WKGVDVSRPG ETDENAVTIQ AEVENLSLEE RRLDEQIREM  240
QERLRELSEN ENNQKWLFVT EDDIKGLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR  300
RYRVVLRSTM GPVDVYLVSQ FEEKFEEINN GVGASPSIPS TSGLNENTSA PLLTEESNQN  360
EIEMQGQEEA HRTCSDINAT PDFASGIMKI VPEVESDADY WLLPDADVSI TDLWGTESVV  420
EWNELGTLHD DFEMANVITP RPQTPPSSTT EVPSAANTTG R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-148	E2F/DP family protein