![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
Previous version:
v3.0
v4.0
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028105354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 461aa MW: 51052.9 Da PI: 4.5024 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 86.1 | 2.6e-27 | 138 | 203 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_028105354.1 138 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 203 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 461 aa Download sequence |
MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK 60 SPRKSETADL VAESSDWNPS TGYVEAVGSP LQTPVSGKGG KAQKAPRMAK SNRSGSQTPV 120 SNVGSPSGNN LTPIGPCRYD SSLGLLTKKF INLIKHAEDG ILDLNKAAET LEVQKRRIYD 180 ITNVLEGIGL IEKKLKNRIQ WKGVDVSRPG ETDENAVTIQ AEVENLSLEE RRLDEQIREM 240 QERLRELSEN ENNQKWLFVT EDDIKGLPCF QNETLIAIKA PHGTTLEVPD PDEAVDYPQR 300 RYRVVLRSTM GPVDVYLVSQ FEEKFEEINN GVGASPSIPS TSGLNENTSA PLLTEESNQN 360 EIEMQGQEEA HRTCSDINAT PDFASGIMKI VPEVESDADY WLLPDADVSI TDLWGTESVV 420 EWNELGTLHD DFEMANVITP RPQTPPSSTT EVPSAANTTG R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-148 | E2F/DP family protein |