PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105353.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 464aa    MW: 51391.4 Da    PI: 4.5352
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.12.7e-27141206171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  XP_028105353.1 141 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 206
                     6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MSTSQANHPT EQIVPQQQHQ LPLKRQLPFS SMKPPFGDYH RFSSPALDLR LKEPEAIVVK  60
SPPLKRKSET ADLVAESSDW NPSTGYVEAV GSPLQTPVSG KGGKAQKAPR MAKSNRSGSQ  120
TPVSNVGSPS GNNLTPIGPC RYDSSLGLLT KKFINLIKHA EDGILDLNKA AETLEVQKRR  180
IYDITNVLEG IGLIEKKLKN RIQWKGVDVS RPGETDENAV TIQAEVENLS LEERRLDEQI  240
REMQERLREL SENENNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVDY  300
PQRRYRVVLR STMGPVDVYL VSQFEEKFEE INNGVGASPS IPSTSGLNEN TSAPLLTEES  360
NQNEIEMQGQ EEAHRTCSDI NATPDFASGI MKIVPEVESD ADYWLLPDAD VSITDLWGTE  420
SVVEWNELGT LHDDFEMANV ITPRPQTPPS STTEVPSAAN TTGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.21e-149E2F/DP family protein