PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097378.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 228aa    MW: 26028.3 Da    PI: 8.9556
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP308.6e-1063102138
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse..d 38 
                     rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ +   
  XP_028097378.1  63 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLDDpsM 102
                     79********************************887541 PP

2E2F_TDP52.11e-161672262271
         E2F_TDP  22 egivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                      + ++l+e+ak L+ +      +++k+RR+YDi+NVL+++n iek     ++k+++rw g
  XP_028097378.1 167 VDLISLEEAAKILLGDahdpsMMRTKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 226
                     4789****************999***********************99999*******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVPSQNGVRC LMLDMYDFHN DIRLCHSFGG ICFNNTSFVY IGHFRILLFS IYLLAITLEV  60
DNRKEKSLGL LTQNFVKLFL CSNVDLISLE EAAKILLDDP SMMRSNDSSL GYLNILLIEG  120
THHPETRKPA FKWLGTRGKS DNGSANTFVL NESKKRISKK NICKYLVDLI SLEEAAKILL  180
GDAHDPSMMR TKVRRLYDIA NVLSSMNFIE KTHHPETRKP AFRWLGTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.15e-27E2F/DP family protein