PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028078478.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 433aa    MW: 48147.6 Da    PI: 5.3481
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028078478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP78.46.5e-25164229171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++++g+++ln+ a+ L   +v  ++RRiYDi+NVLe+++l+ek++kn+ir kg
  XP_028078478.1 164 RYDSSLGLLTKKFISLIQEAKDGTLDLNKTADVL---EV--QKRRIYDITNVLEGIGLLEKTAKNHIRLKG 229
                     6899******************************...99..***************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MEISDEDRNR TLEQSLSQIQ LQSHSHSHSQ NHRSSFPSPS NRSFPPPPSH FRRPLPFAFI  60
PPPNDSNRSS SSSAATSTDF QTTDTSFAFS KFPQTNEIGN CKAKTSRLAT IEGRNEADLV  120
NNTLLGPETC TGGKRYGKPK VARHGTQGSN ADPPDGLNAV SGCRYDSSLG LLTKKFISLI  180
QEAKDGTLDL NKTADVLEVQ KRRIYDITNV LEGIGLLEKT AKNHIRLKGF GMMAPGEVDD  240
QFTTLKAEVE SLYDEEYRLD DCIREKLELL RTVECNENCQ KYLYLTEEDI MSVPCFKNKT  300
LIAIKAPRAS TVEVPDPDED ISFPQRQFRL VVRSSTGPID LYLLSKNGGQ DEDVTVKQVN  360
STDSRSSGGG RHTNLSLDHQ NNLKMAPDTL SPIGSKVSGI QKIVPSDCDV DDDYWFRPDH  420
EVSAIDLWGM EYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.13e-94E2F/DP family protein