PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074977.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 464aa    MW: 51137.1 Da    PI: 4.704
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074977.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.32.3e-27143208171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+irwkg
  XP_028074977.1 143 RYDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 208
                     6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MSGAQASKSP AAAAAAVVPM KRHLLFSSMK PPFVPHEDYH RFSSSSRETH RVDADQVAEA  60
IVVKSPQLKR KSATDHNEVV SSDWTSSPGC TNIANSPLRT PVSGKGGRVY GRSKASKSNR  120
SGPQTPLSNS GCPSPLTPAG NCRYDSSLGL LTKKFINLIK HAEDGILDLN NAADTLEVQK  180
RRIYDITNVL EGIGLIEKKL KNRIRWKGLD ALRPGEVDDD ITMLQAEVEK LSMEERRLDD  240
RIREMQERLR DLSEDENNQK WLFVTEEDIK GLPCFQNETL IAIKAPHGTT LEVPDPDEAV  300
DYPQRRYRII LRSTMGPIDV YLVSQFEEKF EEMNGGEPSM NFPIASSSGS NENPATETTT  360
GSIGVEIEPR AQDGHGLSSD LNVSQDYAGG IMKIVPSDID NDADYWLLSD ADVSITDMWK  420
TDAVVEWDGV DILHEEFGMA DTGTPRPQTP LSGVADADVN ITQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-174E2F/DP family protein