PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060630.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 460aa    MW: 51260.2 Da    PI: 4.5652
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP85.92.9e-27141206171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kf++l++++e+gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  XP_028060630.1 141 RYDSSLGLLTKKFINLIKHAENGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 206
                     6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MSTSRASNMP TEPIMQQSQQ QPLKRQLPFT PMKPPLGDYY RFSPSVVDNR QKEPDAIVFK  60
SPPLKRKSET ADHEAESSDR NPSTGYAEPI SSPLQTPVSG KRGKAQRAPR IAKCNRAGSQ  120
TPVANVGSPS GNNLTPVGPC RYDSSLGLLT KKFINLIKHA ENGILDLNKA ADTLEVQKRR  180
IYDITNVLEG IGLIEKKLKN RIQWKGLDVS RPGEIDENVA TIQAEVENLS IEEHKVDEQI  240
REMQERLREL SENERNQKWL FVTEDDIKGL PCFQNETLIA IKAPHGTTLE VPDPDEAVEY  300
PQRRYRIVLR STMGPIDVYL VSQFEEKFEE INGDEASPSI PLTSGFDGNP AAPMVTEESR  360
NDTEMQGQED HRLCSNINAS QDFVSGIMKI VPEVDSDADY WLLPDGDVSI TDMWTEPGVE  420
WNEFGTIQDD YAMADVSTPH PQTPPSSTTE VPSSANTAGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.21e-145E2F/DP family protein