PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060415.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 298aa    MW: 33212.7 Da    PI: 6.6381
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP69.34.5e-2265144471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +Lr+++     +++k+e+ g++t++eva+e+++e               d+kn+rRR+YD+lNVL+a+++i k +k+ei wkg
  XP_028060415.1  65 GGLRQFSII---ICKKVESkGKTTYSEVADEIIAEltatnnnsavsldefDEKNIRRRVYDALNVLMAMDIIIK-DKKEIWWKG 144
                     589999988...9***9999******************************************************.*******98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDNGCLGDIF DGFGQKHSGG EGSIPALTSD NSTAAAYKDP QISNQLSIHH DGATKKKRVS  60
RIIGGGLRQF SIIICKKVES KGKTTYSEVA DEIIAELTAT NNNSAVSLDE FDEKNIRRRV  120
YDALNVLMAM DIIIKDKKEI WWKGLHNANV KDMEEIKALR VKAMNRIEKK AAYLKELEEQ  180
IAGLQNLMLR NQQLLKSGNA PFGGFSLPFI VVRTNPHATV EIEISEDMQL VHLDFNSTPF  240
SLHDDAYILK LLWRYQLPES TRISPSSSVL SSSSIDVASG GTKPFYWNSE TETAKVYE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15581KKKRVSRIIGGGLRQFSIIICKKVESK
25583KKKRVSRIIGGGLRQFSIIICKKVESKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.12e-64E2F/DP family protein