PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028060415.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 298aa MW: 33212.7 Da PI: 6.6381

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028060415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	69.3	4.5e-22	65	144	4	71
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 +Lr+++ +++k+e+ g++t++eva+e+++e d+kn+rRR+YD+lNVL+a+++i k +k+ei wkg XP_028060415.1 65 GGLRQFSII---ICKKVESkGKTTYSEVADEIIAEltatnnnsavsldefDEKNIRRRVYDALNVLMAMDIIIK-DKKEIWWKG 144 589999988...9*9999**************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MDNGCLGDIF DGFGQKHSGG EGSIPALTSD NSTAAAYKDP QISNQLSIHH DGATKKKRVS 60 RIIGGGLRQF SIIICKKVES KGKTTYSEVA DEIIAELTAT NNNSAVSLDE FDEKNIRRRV 120 YDALNVLMAM DIIIKDKKEI WWKGLHNANV KDMEEIKALR VKAMNRIEKK AAYLKELEEQ 180 IAGLQNLMLR NQQLLKSGNA PFGGFSLPFI VVRTNPHATV EIEISEDMQL VHLDFNSTPF 240 SLHDDAYILK LLWRYQLPES TRISPSSSVL SSSSIDVASG GTKPFYWNSE TETAKVYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	55	81	KKKRVSRIIGGGLRQFSIIICKKVESK
2	55	83	KKKRVSRIIGGGLRQFSIIICKKVESKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	2e-64	E2F/DP family protein