PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028060413.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 299aa    MW: 33299.8 Da    PI: 6.6381
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028060413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP69.34.5e-2266145471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +Lr+++     +++k+e+ g++t++eva+e+++e               d+kn+rRR+YD+lNVL+a+++i k +k+ei wkg
  XP_028060413.1  66 GGLRQFSII---ICKKVESkGKTTYSEVADEIIAEltatnnnsavsldefDEKNIRRRVYDALNVLMAMDIIIK-DKKEIWWKG 145
                     589999988...9***9999******************************************************.*******98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDNGCLGDIF DGFGQKHSGG EGSIPALTSD NSTAAAYKDP QISNQLSIHH DGSATKKKRV  60
SRIIGGGLRQ FSIIICKKVE SKGKTTYSEV ADEIIAELTA TNNNSAVSLD EFDEKNIRRR  120
VYDALNVLMA MDIIIKDKKE IWWKGLHNAN VKDMEEIKAL RVKAMNRIEK KAAYLKELEE  180
QIAGLQNLML RNQQLLKSGN APFGGFSLPF IVVRTNPHAT VEIEISEDMQ LVHLDFNSTP  240
FSLHDDAYIL KLLWRYQLPE STRISPSSSV LSSSSIDVAS GGTKPFYWNS ETETAKVYE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15682KKKRVSRIIGGGLRQFSIIICKKVESK
25684KKKRVSRIIGGGLRQFSIIICKKVESKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.17e-64E2F/DP family protein