PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028059824.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 380aa    MW: 42613.8 Da    PI: 9.8257
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028059824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP726.5e-232085171
         E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                    rkeksL++l+++flkl+++   + + l+++a++L    v  +rRRiYDi+N+Le+++++++k+kn++ wkg
  XP_028059824.1 20 RKEKSLGVLCTNFLKLYNRDGVESIGLDDAANQL---GV--ERRRIYDIVNILESVGVLSRKAKNQYFWKG 85
                    79*****************999************...**..****************************98 PP

2E2F_TDP72.16.1e-23145229171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                     rkeksL+lltq+f+kl+ +s+ + ++l+++a++L+ +         +   k+RR+YDi+NV++++nliek     ++k+++rw g
  XP_028059824.1 145 RKEKSLGLLTQNFIKLFICSSVDLISLDTAATALLGDihdptamrnNSAAKVRRLYDIANVFSSMNLIEKthhpeSRKPAFRWLG 229
                     79****************************************999977789*******************9999999******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MSSLPPPPES QTRNPYYYSR KEKSLGVLCT NFLKLYNRDG VESIGLDDAA NQLGVERRRI  60
YDIVNILESV GVLSRKAKNQ YFWKGFGAIP QALDQLKEEA LRENFSTSGC FHSANASSEN  120
HKGGPSNSKT DRQEKSSASC KVDNRKEKSL GLLTQNFIKL FICSSVDLIS LDTAATALLG  180
DIHDPTAMRN NSAAKVRRLY DIANVFSSMN LIEKTHHPES RKPAFRWLGL KGSPKNGHAT  240
SLDLNESRKR MFGTEITNTL PKKYKTDSAL DCNSNQNADM PTHKRRSNLK DEHGRNSTEQ  300
QGKHSSKGFV FGPFTPANMP KVGDSENKNA RRVQGLEDLA SSYRPLYRNQ ALSDLFGHYV  360
EAWKSWYDEV AGKKQIQEVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-118E2F/DP family protein