PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028051660.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family E2F/DP
Protein Properties Length: 388aa    MW: 43821.3 Da    PI: 9.3726
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028051660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP76.23.2e-242085171
         E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                    rk+ksL+ll+++fl+l+++ + +++ l+++a++L    v  +rRRiYDi+NVLe+++++++k+kn+++wkg
  XP_028051660.1 20 RKQKSLGLLCTNFLSLYNQDNVETIGLDDAATRL---GV--ERRRIYDIVNVLESIGVLARKAKNRYSWKG 85
                    79*****************999************...**..****************************98 PP

2E2F_TDP78.65.6e-25153233171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                     rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ +      +++k+RR+YDi+NVL+++n iek     ++k+++rw g
  XP_028051660.1 153 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLGDahdpsMMRTKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 233
                     79***************************************999***********************99999*******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MALPPSASNE SGSANFPYCR KQKSLGLLCT NFLSLYNQDN VETIGLDDAA TRLGVERRRI  60
YDIVNVLESI GVLARKAKNR YSWKGFGGVP KTLQQLREEG LRENFNTFNG NNYVKVSDDD  120
EDEKISNPIT SQNDKLNPSS VTKSSTASKT DNRKEKSLGL LTQNFVKLFL CSNVDLISLE  180
EAAKILLGDA HDPSMMRTKV RRLYDIANVL SSMNFIEKTH HPETRKPAFR WLGTRGKSDN  240
GSANTSVLNE SKKRIFGTEI TNTSFKRTKV VSTIDENSKQ ITKTHLQMLV KCEDLENEVD  300
KSNFEQDLRH SSKNFQFGPF APVTVHVSKF GATQNSTVKQ VHDWESLAST YRPQYYNQAL  360
RDLFAHYVEA WKSWCSEVAG KNPIQLIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-126E2F/DP family protein