PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Extended TF repertoires
To release the TF repertoires of newly sequenced species or previously collected species with new gene annotation in time, we set up the module "extended TF repertoires". Currently, it includes the TF repertoires of 64 plant species, 55 of which are newly sequenced and 9 of which have new gene annotation.

Species Source Annoation TF list CDS sequences Protein sequences
Abrus precatoriusLos Alamos National LaboratoryNCBI-100downloaddownloaddownload
Actinidia chinensisEuropean Nucleotide ArchiveEnsemblPlants-v43downloaddownloaddownload
Apostasia shenzhenicaThe Orchid Conservation and Research Center of ShenzhenNCBIdownloaddownloaddownload
Arabidopsis thalianaAraportAraport11downloaddownloaddownload
Asparagus officinalisUniversity of GeorgiaV1.1downloaddownloaddownload
Botryococcus brauniiTAMUv2.1downloaddownloaddownload
Camellia sinensis var. sinensisAnhui Agricultural UniversityNCBI-100downloaddownloaddownload
Capsicum baccatumSeoul National UniversityNCBIdownloaddownloaddownload
Capsicum chinenseSeoul National UniversityNCBIdownloaddownloaddownload
Chara brauniiKanazawa UniversityNCBIdownloaddownloaddownload
Chenopodium quinoaKAUSTv1.0downloaddownloaddownload
Chlorella variabilisJGI/MycoCosmv1.0downloaddownloaddownload
Chromochloris zofingiensisUC Berkeleyv5.2.3.2downloaddownloaddownload
Chrysanthemum seticuspeKazusav1.1downloaddownloaddownload
Cinnamomum micranthum f. kanehiraeAcademia SinicaNCBIdownloaddownloaddownload
Citrus unshiu-NCBIdownloaddownloaddownload
Coffea arabicaJohns Hopkins UniversityNCBI-100downloaddownloaddownload
Coffea eugenioidesJohns Hopkins UniversityNCBI-100downloaddownloaddownload
Corchorus capsularisBangladesh Jute Research InstituteEnsemblPlants-v43downloaddownloaddownload
Cucumis meloMelonomicsv4.0downloaddownloaddownload
Cucurbita maximaNational Center for Biotechnology InformationNCBI-100downloaddownloaddownload
Cucurbita moschataNational Center for Biotechnology InformationNCBI-100downloaddownloaddownload
Cucurbita pepo subsp. pepoComav-UPVNCBIdownloaddownloaddownload
Cynara cardunculus var. scolymusCompositae Genome ProjectNCBIdownloaddownloaddownload
Dendrobium catenatumThe Orchid Conservation and Research Center of ShenzhenNCBI-101downloaddownloaddownload
Dioscorea rotundataIwate Biotechnology Research CenterEnsemblPlants-v43downloaddownloaddownload
Durio zibethinusThorn BiosystemsNCBI-100downloaddownloaddownload
Ensete ventricosum-NCBIdownloaddownloaddownload
Erythranthe guttataJGIv2.0downloaddownloaddownload
Fragaria vescaUniversity of Floridav4.0.a1downloaddownloaddownload
Handroanthus impetiginosusInstituto de Ciencias Biologicas,Universidade Federal de GoiasNCBIdownloaddownloaddownload
Herrania umbraticaMars, IncorporatedNCBI-100downloaddownloaddownload
Hevea brasiliensis-NCBI-100downloaddownloaddownload
Ipomoea nilNational Institute for Basic BiologyNCBI-100downloaddownloaddownload
Kalanchoe fedtschenkoiJGIv1.1downloaddownloaddownload
Lupinus angustifoliusCommonwealth Scientific and Industrial Research OrganisationEnsemblPlants-v43downloaddownloaddownload
Macleaya cordataChinese Academy of Agricultural SciencesNCBIdownloaddownloaddownload
Malus domesticaChinese Academy of Agricultural Sciencesv1.0downloaddownloaddownload
Momordica charantia-NCBI-100downloaddownloaddownload
Mucuna pruriensAfrican Centre of excellence in Phytomedicine ResaerchNCBIdownloaddownloaddownload
Nicotiana attenuataMax Planck Institute for Chemical EcologyEnsemblPlants-v43downloaddownloaddownload
Olea europaea var. sylvestrisOlive Genome Consortiumv1.0downloaddownloaddownload
Oryza glumipatulaOryza Genome Evolution ProjectEnsemblPlants-v43downloaddownloaddownload
Oryza sativa f. spontaneaOryza Genome Evolution ProjectEnsemblPlants-v43downloaddownloaddownload
Papaver somniferumXi'an Jiaotong UniversityNCBI-100downloaddownloaddownload
Parasponia andersoniiWageningen UniversityNCBIdownloaddownloaddownload
Prunus aviumKazusav1.0.a1downloaddownloaddownload
Prunus domesticaUSDAv1.0.a1downloaddownloaddownload
Punica granatum-NCBIdownloaddownloaddownload
Pyrus communisPalmerston North Research Centrev1.0downloaddownloaddownload
Quercus suberGenosuberNCBI-100downloaddownloaddownload
Rosa chinensisUniv Lyonv2.0downloaddownloaddownload
Rosa multifloraKazusav1.0downloaddownloaddownload
Rubus occidentalisMichigan State Universityv3.0downloaddownloaddownload
Salvia splendensBeijing Forestry UniversityNCBIdownloaddownloaddownload
Schrenkiella parvulathellungiella.orgv2.0downloaddownloaddownload
Sorghum bicolorJGIv3.1.1downloaddownloaddownload
Tetrabaena socialisVolvocales Genome ConsortiumNCBIdownloaddownloaddownload
Trema orientale-NCBIdownloaddownloaddownload
Trifolium mediumMasaryk UniversityNCBIdownloaddownloaddownload
Triticum aestivumInternational Wheat Genome Sequencing ConsortiumEnsemblPlants-v43downloaddownloaddownload
Triticum dicoccoidesWEWseq consortiumEnsemblPlants-v43downloaddownloaddownload
Vigna unguiculataUC Riversidev1.1downloaddownloaddownload
Zea maysGrameneEnsemblPlants-v43downloaddownloaddownload