PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc11335.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 109aa    MW: 11381 Da    PI: 11.5522
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc11335.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-082883154
                                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHH CS
                           HLH  1 rrrahnerErrRRdriNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksL 54
                                  +rr+ +e+Er RR+ +   ++eL  l+P  +    ++   +   ++e+Av Y+  L
  Zpz_sc11335.1.g00010.1.am.mk 28 KRRKTPEIERARRRTMSGLYAELAALIPGvPArVSNDVQTTRTRVVEEAVAYVGAL 83
                                  79999************************766777777799999999999998665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.09E-82595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.64E-62580No hitNo description
Gene3DG3DSA:4.10.280.101.2E-82785IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.5922783IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-62883IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-43389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
MVGGEAPVTP SLAAEGKRSP ATAAPSSKRR KTPEIERARR RTMSGLYAEL AALIPGVPAR  60
VSNDVQTTRT RVVEEAVAYV GALRAAAAEL EAQRVVAAGR SRVAARTDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12840RRKTPEIERARRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc11335.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022682965.13e-14uncharacterized protein LOC111257451
TrEMBLA0A1E5V8M34e-14A0A1E5V8M3_9POAL; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91411931