PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04718.1.g00020.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ZF-HD
Protein Properties Length: 359aa    MW: 38277.8 Da    PI: 7.8441
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04718.1.g00020.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer331.4e-102052421856
                   ZF-HD_dimer  18 GghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 
                                   Gg   DG    + +     +++al+Ca CgCHRnFHR e
  Zpz_sc04718.1.g00020.1.am.mk 205 GGDGADGGTTRYRE-RGGLHIDALRCATCGCHRNFHRIE 242
                                   67777776655555.333589****************76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047705.9E-8206242IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257746.0E-5224245IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
METGTTGGGD EMRGRHAVVP WRRRHVVVAA SKLWFNPLDP KDRMELNQLL YNPISGDPTE  60
SFSGPDGCMG AGPRVNTLLL RCWLPLPVIS RGRPWSCVPG DEPTAYTTKP QPTAHQAGWC  120
RDHKQQLASL QPAAARVPPG GRRTTVMDFD EHDDGDDEEM QQPMPVSSSY DTPMQPGLVL  180
GGGGGTPKPE DSRGSASFRT AGPGGGDGAD GGTTRYRERG GLHIDALRCA TCGCHRNFHR  240
IESGSPTTAE PAALLSPAAV TAYGVATQHP FSTYYRTPTG YLYHHQHQQH LAAAAAGHMQ  300
RPLALPSTSH SGGRDEGDDV SGMIRPTCMV VAPLVGMSLG SGSGGQSGSG MKRFRTKFT
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
UniProtPutative transcription factor. {ECO:0000250}.