PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04146.1.g00040.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 62aa    MW: 7252.34 Da    PI: 8.4748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04146.1.g00040.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-052854127
                                    CHHHHHHHHHHHHHHHHHHHHHHHCTS CS
                             HLH  1 rrrahnerErrRRdriNsafeeLrell 27
                                    ++  + erE+  Rd++N+ f eL ++l
  Zpz_sc04146.1.g00040.1.sm.mkhc 28 KKNHKAEREKLKRDQLNDLFLELSSML 54
                                    567789******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.76E-52055IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
MPFPCGGVIK GGEYCTLSDQ RSQDKNPKKN HKAEREKLKR DQLNDLFLEL SSMLAYFVYF  60
CY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04146.1.g00040.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2228244