PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04044.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 221aa    MW: 24003.4 Da    PI: 8.397
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04044.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.10.000732183955
                                  TCHHHHHHHHHHHHHHH CS
                           HLH 39 sKaeiLekAveYIksLq 55
                                  +Ka+i + A+ YI +Lq
  Zpz_sc04044.1.g00010.1.am.mk  2 DKASIIRDAIAYIEKLQ 18
                                  8***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.7E-6138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MDKASIIRDA IAYIEKLQEE ERRMLAEIAA LESSTAAVEA EDAGGLAADD ADSFPCPKKP  60
RRAPPADDGA RCAPSAPPVQ ILEEMRSCDA QVQVSEAGER VAVVSVRCSR GRDAVSKVCR  120
ALEPLRLRIV TATVAAVGDT VVHTIATSQL VSLPSTGTPH RRHLPAMRCR RSAGEAGREI  180
EERRQEEQRG EVMRQVHPLV ATHANRALAR THTAPKRRVL L
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04044.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823076.15e-48transcription factor bHLH35-like isoform X1
TrEMBLA0A0A9IMR03e-50A0A0A9IMR0_ARUDO; Uncharacterized protein
STRINGPavir.Gb02374.1.p2e-46(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.34e-15bHLH family protein