PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03327.1.g00030.1.es.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 246aa    MW: 27066.2 Da    PI: 7.7449
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03327.1.g00030.1.es.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.1e-061159254
                                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                    +  + erE+  Rd++N+ f eL ++l  +     + + Ka+iL  A + +++L
  Zpz_sc03327.1.g00030.1.es.mkhc 11 KNHKAEREKLKRDQLNDLFLELSSMLDLD----RQNNGKASILGDAARVLQDL 59
                                    677899********************997....67889999999999988877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.71E-11673IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.98E-4764No hitNo description
Gene3DG3DSA:4.10.280.101.7E-7778IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.109959IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00111565IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
DQRSQDKNPK KNHKAEREKL KRDQLNDLFL ELSSMLDLDR QNNGKASILG DAARVLQDLV  60
TQVESLRKEQ SALLAERQYV SSEKNELLDE NATIKARISE LQHELCARMG NNSISLRSIA  120
MSHPMANSTN IGIATQPMQH QLWSSIPNLS TVTMTQSTNT VSTLHSQQHR PALVGQAHAS  180
RPQELQLFPG TSSPPEHECP SLRSAPTSTS SLTDSLPGQL QLSLPQSSLE GSSNSVSGSR  240
REQKNG
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03327.1.g00030.1.es.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025826529.11e-106transcription factor BHLH062-like isoform X1
TrEMBLA0A0A9CGL01e-119A0A0A9CGL0_ARUDO; Uncharacterized protein
STRINGSi026752m1e-101(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129592124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.35e-32bHLH family protein