PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03130.1.g00080.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 246aa    MW: 27160.7 Da    PI: 11.4969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03130.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.4e-05213237529
                                   HHHHHHHHHHHHHHHHHHHHCTSCC CS
                           HLH   5 hnerErrRRdriNsafeeLrellPk 29 
                                   h +rEr+RR+++ ++++ L  l+  
  Zpz_sc03130.1.g00080.1.am.mk 213 HMMRERQRREKLSQSYADLYALVAA 237
                                   889****************998866 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.33E-5203242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MRSRKRKTQR VVVRDFSTGP PTRNLRPGPS HSLIRRVRHL TPSLQARTSS VRHRQRLPFP  60
NYAPFDHVTV SPNTNTGAYL NPRPSASGET SRSSLRARRS TVGMDSYYAG FGFNDEIPCF  120
YPHGAAPASP ELPFGFDAVS PFVEPPGAPV LQAGSEVRGY GSAAGPEVIT GGAPQMEMMD  180
AMGAMRADRD QCQTRGEGRR PPGTVESSRG FRHMMRERQR REKLSQSYAD LYALVAARSK  240
VSLLTR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
127SRKRKT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03130.1.g00080.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3659032e-34AK365903.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038M22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022678746.11e-30transcription factor BHLH148-like isoform X2
TrEMBLA0A368SEV04e-30A0A368SEV0_SETIT; Uncharacterized protein
STRINGSi036716m3e-30(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59403450