PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02597.1.g00100.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ZF-HD
Protein Properties Length: 607aa    MW: 64323.9 Da    PI: 9.1352
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02597.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer323e-104704903656
                   ZF-HD_dimer  36 gtaaalkCaACgCHRnFHRre 56 
                                    +++al+Ca CgCHRnFHR e
  Zpz_sc02597.1.g00100.1.am.mk 470 LHIDALRCATCGCHRNFHRIE 490
                                   4699***************76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047701.7E-7471490IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257743.0E-4472493IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    Send to blast
MHVAVVADVG RQDGRTELLA RSVPRAASLS SGAYMHAAPA PTDRSRGGPT SLHAAYMHGS  60
RRVSVARTSR ALSLLGGRLV TGREGAGART DWQGAVEPDT VARMSTSDRP AVPQKRAVRS  120
SELRPRVETD KPRGKGLCML SSSLVTHACA LLLPPPPNLR IDDQSGLVAS NKPTMHGSWR  180
ARKVGAVRCV PFVGRTITLT PPPPRAAAAT APPSHLVAAT AVPSPLLQCC AGLHRYPVVP  240
VSDATTFTSS LQLPCHREKE RGSRRLDVTV VASETGITGG GDEMRGRHAV VPWRRRHVVV  300
AASKLWFNPL DPKDRMELNQ LLYNPISGDP TESFSGPDGC MGAGPRVNTL LLCSHNETAV  360
IPVYPAYLPP CPGRSMRLYI AVAELYPTVN EDLVMDFDEH DDGDDEEMQQ PMPVSSSYDT  420
PMQPGLVLGG GGGTPKPEDS RGSASFRTAG PGGGDGAGAG TTRYRERGGL HIDALRCATC  480
GCHRNFHRIE SGSPTTAEPA ALLSPAAVTA YGVATQHPFS TYYRTPTGYL YHHQHQQHLA  540
AAAAGHMQRP LALPSTSHSG GRDEGDDVSG MIRPACMVVA PLVGMSLGSG SGGQSGSGMK  600
RFRTKFT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02597.1.g00100.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4878923