PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02539.1.g00110.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 405aa    MW: 43019.6 Da    PI: 8.9663
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02539.1.g00110.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.6e-1397147555
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                           HLH   5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                                   h ++Er RR+r+   f+eL  llP++ k + +   +K++i+++A++YI+sL+
  Zpz_sc02539.1.g00110.1.am.mk  97 HYMVERERRRRMTGMFAELNALLPNSNK-KVRAyTDKVTIVTEAINYIRSLE 147
                                   889**********************633.33446****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.30692146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-1097147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-1397167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-1397166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-998152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-4105148No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MAQDGHHAGH QGAVDASDGH GTPAPAVTSP RESSNQGTWR RVRAVAADDV DNRKDVVDLA  60
PVKVERADVR VTDDDVTKGK GKAPADADGA GNEVPPHYMV ERERRRRMTG MFAELNALLP  120
NSNKKVRAYT DKVTIVTEAI NYIRSLEDTY QKLEKRRREL ALARQASQPD HGAGSSSAPP  180
PYDAGQATGL SPVLSLDLAG SSSVPPPDAG WLSMGLSPVL PLGRAGSSSV PPPGTFLGTG  240
RSSFLPLGRA GSSSVPPPGT FLGTGQSSVL PLGRADSSSV LLPPAFLGWS WLPKRRKPEA  300
GEVAVPQPIG FQTYSEANVG LNLMGDDAFI TTCVPKRPGV LLLVLTILEK HHIDVISGHI  360
LSDVNRSKFT LYTRVSSYIL INLSSSILVS WFPAFGLTFG CSSSY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02539.1.g00110.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2820935
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-08bHLH family protein