PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02446.1.g00150.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 251aa    MW: 28059.1 Da    PI: 11.5056
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02446.1.g00150.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.6e-05218242529
                                   HHHHHHHHHHHHHHHHHHHHCTSCC CS
                           HLH   5 hnerErrRRdriNsafeeLrellPk 29 
                                   h +rEr+RR+++ ++++ L  l+  
  Zpz_sc02446.1.g00150.1.am.mk 218 HMMRERQRREKLSQSYADLYALVAA 242
                                   889****************998866 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.47E-5207247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MRSRKRKTQR VVVRDFSTGP PTRNLRPGPS HSLIRRVRHL TPSLQARTSS VRHRQRLPFP  60
HPQHQHRCLF KPASERLRGD KPLVTPRPPL HGCLLAERRR SPGEMQVGMD SYYAGFGFND  120
EIPCFYPHGA APASPELPFG FDAVSPFVEP PGAPVLQAGS EVRGYGGAAG PEVITGGAPQ  180
MEMMDAMGAM RADRDQCQTR GEGRRQPGTV ESSRGFRHMM RERQRREKLS QSYADLYALV  240
AARSKVSLLT R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
127SRKRKT
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02446.1.g00150.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3659032e-34AK365903.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038M22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022678746.12e-30transcription factor BHLH148-like isoform X2
TrEMBLA0A368SEV01e-29A0A368SEV0_SETIT; Uncharacterized protein
STRINGSi036716m1e-29(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59403450