PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02372.1.g00140.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 481aa    MW: 52680.3 Da    PI: 8.7392
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02372.1.g00140.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-11316359755
                                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +ErrRR r+N+ +  Lr ++P+      +K+sK  +L  A+++Ik+Lq
  Zpz_sc02372.1.g00140.1.am.mk 316 DAERRRRGRLNNNILALRAVVPNI-----TKMSKEHTLSDAIDHIKNLQ 359
                                   68*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.157309358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-16311377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-9315359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.6E-13315364IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-14316372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
DSGRAALDSR TQRERRQTRG GTGSGRVAAA RFEGAARRSQ GGQARRRPEK CVDQPERKER  60
EQSHGRVVGT GSRVNGGAYS EKVTAFPEPR GKRRTHLPES SRKTMAVTKK AAVCFWLLSS  120
EEVRVSDAAD CIFIIHPFCK HDGDCDKPCE NESDGFDGYI YTQGMCRDWT CFCCAPDHHK  180
NKGKPGGPHK PLAPDHSLPE AISNLSFTLN GAAPTNSLGT RGAVALAFKA SPLRFLSCRM  240
PRAYNFISHP QPRGEGVGPS CVRGEAAMPR RQRARSSEEV KVEDFVASVL NFAGGEDDDG  300
QPPAAATTVF KSKNLDAERR RRGRLNNNIL ALRAVVPNIT KMSKEHTLSD AIDHIKNLQN  360
QVQELQQQLD ESPGEVLEKH GSASSSESFA AAENTQYQGL VELAPLAPQK YHLKVFCKKS  420
GVFTKVLEAL CSYNAQVTSL STITFYGYAE SVFSIEVKGE QDVVMMELRS LLTGIVEVPS  480
N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19195KRRTH
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02372.1.g00140.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119823036