PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02277.1.g00050.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 389aa    MW: 41128.2 Da    PI: 9.5828
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02277.1.g00050.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-06289315430
                                     HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                             HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                                     +h+ +Er RR++i +++  L++l+P +
  Zpz_sc02277.1.g00050.1.sm.mkhc 289 SHSLAERVRREKISQRMKLLQDLVPGC 315
                                     8************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-7283320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.84E-5283326No hitNo description
PROSITE profilePS508889.28285339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-7288317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MNCGPPDQMP PATAPSCFLN LNWDQSMAAA GNGDRLDPAL SSMVSSPASN STAAAASDGL  60
ALHGISPQPQ YGGTPLSSPP KLNLSMMGQF HHYPRPLVGG AGAAGQPILE NFMPPMGRMD  120
QFLADPGFTE RAARLSSFDG RAGAYAGAVP GQFGLPDAGP VGALKELELG NGRDESSMSD  180
PASASADMTL KGPSDGNARK WKASGKGKGK DGPVSTSAKD LAKEESSGKR CKSGDESNGA  240
EENSARGKAA QNSNENGGKK QGKDSTSKPT EPPKDYIHVR ARRGEATDSH SLAERVRREK  300
ISQRMKLLQD LVPGCNKFLS MKLATVNPQL DFNNLPNLLS KDAFNKTRGG AKGQTGGTNK  360
LRWEWICWKM LLGVHHQTKQ CDGIQAMLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02277.1.g00050.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971039.10.0transcription factor bHLH77
TrEMBLA0A0A9QTY70.0A0A0A9QTY7_ARUDO; Uncharacterized protein
STRINGSi001242m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-39bHLH family protein