PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02256.1.g00130.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 309aa    MW: 32411.6 Da    PI: 6.4006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02256.1.g00130.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11106153253
                                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                                   r++  + Er RR+ +++ f+eLr llP      skK +  +++e++++YI  
  Zpz_sc02256.1.g00130.1.sm.mk 106 RTSTFMLERARRKLMKENFAELRALLPGV----SKKTNRETTVEETIRYIGV 153
                                   89999***********************8....7****************65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.52E-12103171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.99E-9103159No hitNo description
PROSITE profilePS5088812.481104154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-11104173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-8106154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-8110160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550217.5E-5245295No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MTQDGHHAGH LQGADGNGTP PPAITREPGS GESSNQASTW TPVPAVAAEV DGSNGKGDDV  60
VPSVHGAGLA AGNVDAGTDV MVAEEDVSTK SKGKAPASDG AGKKARTSTF MLERARRKLM  120
KENFAELRAL LPGVSKKTNR ETTVEETIRY IGVLEDTVKT FEKRKQELAL ERERRQAAAQ  180
PDLGAGPSSA AAPPDAGQVP ILSPVLPQGW CWLPKQQPAA PGAVAEQPRV GFRTWTDSNV  240
VMNVCGDAAF ITVCAAPRPG VLVLLLSVLA KHHIDVLTLE ISSDANRSLF HMCTRASDLV  300
LCGADLAGY
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02256.1.g00130.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2480335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-08bHLH family protein