PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01926.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 339aa    MW: 37163.3 Da    PI: 5.8777
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01926.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000592723061055
                                   HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   rrRR+riN+++  L++l+  +           ++Le+Av+Y++ Lq
  Zpz_sc01926.1.g00010.1.am.mk 272 RRRRERINDKLKILQKLVDIS-----------TMLEEAVQYVRFLQ 306
                                   9****************9776...........67888888887777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-10261322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-7267319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-4268311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-8271310No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MPSTNLGFCP PALAVASRTP RMSQAELLHW CSAYHAAPPA DDESEIVAQF LAAPYPYQND  60
DDDQDHQKQL GDDIRTGSAY WPEHVADPGA GACYWPPNAD SSNRGNASSD GGYVDNGGFY  120
YYYLGEPDVS LGINTRATLP CTSLDLNLLG DGEEERSVCA QLPVPDPNPS AADHVRVFHH  180
DVGNDGTTVS RPKRKVPASR DEGDLRGGHR KKEKKASTSS KPGQKCFQEK AQSSSSCSRN  240
ESNCSEAQAC GVNVKTRASK GSATDPQSLY ARRRRERIND KLKILQKLVD ISTMLEEAVQ  300
YVRFLQLQIK MLSSDEMWMY APIAYNGMSL GIDLKISPQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192214KRKVPASRDEGDLRGGHRKKEKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01926.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025796889.11e-110transcription factor bHLH85-like
TrEMBLA0A2S3IHT21e-109A0A2S3IHT2_9POAL; Uncharacterized protein
TrEMBLA0A3L6TQD71e-109A0A3L6TQD7_PANMI; Transcription factor bHLH85-like
STRINGSi039720m1e-108(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP144452123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-43bHLH family protein