PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01514.1.g00050.1.es.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 256aa    MW: 28419.2 Da    PI: 9.9563
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01514.1.g00050.1.es.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57339.81.2e-1232117697
                          DUF573   6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 
                                      ws++D i +L +l    +++g      ++ +   v++s++  + s s+l eK+rrLK++++k v+k      +  s++
  Zpz_sc01514.1.g00050.1.es.mkhc  32 AWSNKDSIKILEALAAHVQSEGR--LPKTNFLLAAVRDSLDrKDCSYSDLYEKVRRLKERYEKTVSK-----GVLPSEK 103
                                     6****************999995..567899*********83579**********************.....3444566 PP

                          DUF573  84 hdqkifelskkiWg 97 
                                     ++ ++++lsk iWg
  Zpz_sc01514.1.g00050.1.es.mkhc 104 DELQMYHLSKAIWG 117
                                     6779*********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.1E-1732117IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
KAKKPGGKPE KSGLDSTQPL SKSEKSARAP CAWSNKDSIK ILEALAAHVQ SEGRLPKTNF  60
LLAAVRDSLD RKDCSYSDLY EKVRRLKERY EKTVSKGVLP SEKDELQMYH LSKAIWGDKA  120
KGAIAASATQ NVSTATKSNK GQDNKEKMDG SSRGGTSKDA THKEEAEIGA RMLQGMRRSS  180
DELQNLYPSL AWSVETMVLQ HPCGETLKRG FEFIDDQKAN SFESKIEKQR ISEVKVQLRR  240
ADISKEVLKM LNASAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01514.1.g00050.1.es.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571636.12e-61hepatoma-derived growth factor-related protein 2
TrEMBLI1I2T66e-60I1I2T6_BRADI; Uncharacterized protein
STRINGBRADI3G20610.19e-61(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72892737