PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01432.1.g00070.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 429aa    MW: 46091.4 Da    PI: 6.8314
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01432.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-12180231155
                                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   +r +h ++Er+RR+++N+ ++ Lr+l+P +   +  + + a+i+  A++++k+L+
  Zpz_sc01432.1.g00070.1.am.mk 180 QRITHIAVERNRRRQMNEYLAVLRSLMPDS---YVHRGDQASIVSGAIDCVKELE 231
                                   799***************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.93E-13178235No hitNo description
SuperFamilySSF474594.45E-17178253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.424179230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9180231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-13181246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-10185236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MNCVDSCKLV KISWSIRLRG EGDLAIHATG RLKHFLAAAA APTACPSTKL ALSFTSDSAI  60
CMPDSTAAQL TRARALSYAM LYTSTIDMTL QEALCAPSSD VLIYDTFNAA ACAPSATGSF  120
LVVGNGATEA MALPVPMEVP VAAPTPAQEA EGETRAVHQG RRKRRRRERS VKNHEDAENQ  180
RITHIAVERN RRRQMNEYLA VLRSLMPDSY VHRGDQASIV SGAIDCVKEL EQQLQSLEAQ  240
KRALLAAQHQ QKRNSMAVER DTAQMPMSNS PANGAAGEKG EEEEEAAPAS PPPFSRFFRY  300
PQYVWLHARP REDGAEEASR ASGVADVEVS VVVDAHASVR VMAPRRPGQL HKMVAGLQAL  360
GLAVLHLNVT AADAVVLYTL SLKVEEGCAL TAADEIAAAV HHVMCIIEAE ATTQQRVLAA  420
GVGQTPGLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154166RAVHQGRRKRRRR
2160166RRKRRRR
3160167RRKRRRRE
4161165RKRRR
5161168RKRRRRER
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01432.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0613236e-76BT061323.1 Zea mays full-length cDNA clone ZM_BFb0135D07 mRNA, complete cds.
GenBankKJ7278456e-76KJ727845.1 Zea mays clone pUT5889 bHLH transcription factor (bHLH134) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021319605.11e-115transcription factor bHLH96-like
TrEMBLA0A1B6PMY01e-113A0A1B6PMY0_SORBI; Uncharacterized protein
STRINGSi010485m1e-106(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37123678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-34bHLH family protein