PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01263.1.g00030.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 392aa    MW: 42106.4 Da    PI: 8.8892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01263.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.85.9e-11197244454
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    h+e+ErrRR+riN  +++Lr+++  +   +sk ++Ka+ L  A+  +k+L
  Zpz_sc01263.1.g00030.1.am.mk 197 VHSEAERRRRERINAHLATLRRVMVVP---DSKQMDKATLLATAISQLKDL 244
                                   59*************************...9999***********999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.649193244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.37E-13196270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.6E-9197244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.0E-11197253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-9199250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2607.7E-4293349No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MKPIVVQLAP SQQGASLPPS PRMMNQGWVP NGSFYIFSIK MSKTISAARG SGTRSSRPGS  60
EDDFWRPYAD TRRRPSPEIL SADAVLPPPT EGDDDESLQF AFAIEGDGGL GRGQMSAPSC  120
RPFQTGAQQR EQRHTPAPLQ QHGVIRGRLP SSVYRGTATA LQQAISTSVP APASLQERSL  180
SSSSSGRSAA EERALKVHSE AERRRRERIN AHLATLRRVM VVPDSKQMDK ATLLATAISQ  240
LKDLRRKASE ITHPPPAVPA EADSVTVHCH PHPHPDPGAG DDDDRAPLYV HASVSCDDRP  300
GLLADIATAV CGLRLRPLRA DVASLGGRTR CSFVLCTEGG DGNMVTRSLE EDVRQVLAGA  360
AFAEMERGCG GGSTSKRQRV LEPRALYSGA MN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201206ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01263.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978282.13e-65transcription factor bHLH51
TrEMBLA0A2T7E8P12e-64A0A2T7E8P1_9POAL; Uncharacterized protein
STRINGPavir.J32610.1.p1e-62(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33473678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.11e-21basic helix-loop-helix 32