PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01161.1.g00180.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 224aa    MW: 25271.7 Da    PI: 8.8596
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01161.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-184898155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  s++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aaka+++a++ l+g
  Zpz_sc01161.1.g00180.1.am.mk 48 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAAKAYDEAARLLRG 98
                                  79********.7*********32...35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.24E-1648105No hitNo description
SuperFamilySSF541715.3E-1948107IPR016177DNA-binding domain
PfamPF008472.1E-124898IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2749106IPR001471AP2/ERF domain
PROSITE profilePS5103219.83649106IPR001471AP2/ERF domain
SMARTSM003805.8E-3449112IPR001471AP2/ERF domain
PRINTSPR003673.6E-75061IPR001471AP2/ERF domain
PRINTSPR003673.6E-77288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MELHFQLQPP AVSFQVDDYC YYYYQQEAAA QAKPVKPRGR KKGSNHHSKF VGVRQRPSGR  60
WVAEIKDTTQ KIRMWLGTFE TAEAAAKAYD EAARLLRGAD TRTNFTPRIS PDCPLAVRIR  120
GLLHHKKVKK QAKFDSWMFD SAFGQFPALD GFPAAADSSV PTAPALEEPR PAAAPGEMVE  180
FERIKVERRI SASLYAMNGL QEYFDRVFDA SACDSLWDLS PLCH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276611e-115KJ727661.1 Zea mays clone pUT5588 AP2-EREBP transcription factor (EREB62) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002281619.12e-60PREDICTED: ethylene-responsive transcription factor RAP2-11
RefseqXP_015646240.16e-60PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A0D3GSP73e-70A0A0D3GSP7_9ORYZ; Uncharacterized protein
STRINGVIT_08s0007g07250.t017e-60(Vitis vinifera)
STRINGBGIOSGA024035-PA2e-59(Oryza sativa Indica Group)
STRINGLOC_Os07g38750.12e-59(Oryza sativa Japonica Group)
STRINGORGLA07G0253000.12e-59(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-26related to AP2 11