PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01093.1.g00070.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 846aa    MW: 92489 Da    PI: 11.3254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01093.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12.1e-05687708526
                                   HHHHHHHHHHHHHHHHHHHHCT CS
                           HLH   5 hnerErrRRdriNsafeeLrel 26 
                                   h + ErrRR+r+N++fe+Lr+l
  Zpz_sc01093.1.g00070.1.am.mk 687 HMISERRRRERLNESFETLRRL 708
                                   8889****************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.41E-6676708IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.9E-5685708IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    Send to blast
MGVVRSGWRC PHFIRRKGGS TRREESPWRH KRKRGTRASR GAGGRRDGMA GRHDDAFRYR  60
MPPKGQRRLT EMRSGEVLVL RFQRTCSSFP EPLPTGSEKR SLSPGGCMAF TRGHVESHFD  120
RPPRRNPIRS GASPPPPHAR ACLYLTGFAL STRARRERAS SSISRRSRLL QVRHHQGSPA  180
DRTPGTSASS AARMRERPAP ASAPVATTTG PARRSQLHEL LHSSERRASG DLPFPRPLKP  240
QWHVVHSGPD SFALPHSTTA HSNCSFHEHD RRRSQNPTAM DMDAVQWLVS GQLLILRPFD  300
LDKRERAWPR WKQRGHGHAA SNYHEKQHSR AAPLMDAIFA LAPGPRARVL ERTAARIPGC  360
LYLFLWAPVI AGPLVRSGHL FCLDTWIGNG GVRVRAVFEA YRGSLCAVVS GCVPGWAFKD  420
GRAYMELSEP DLTASASLQV QQQCSTLIKF DVVMQMAVFM GCDGGEMEIG LSSNDSPGAV  480
ADHVQQSLLE ELMQMTPPRP PSSSSSSLPS LSIGSPEYSS LIRSMTTTAT EPSSSRERHP  540
LPLHPAAQLP GFLPPVHGQA PFPSSEAEDA AMAQAILAVI ASSAPPAPAT TTPPPLSPPW  600
LVRHRAQRSS PRRWTGAFKA YNAALSPRSR PRPGAPGQRV VKTAIALMVS VHMAMREREI  660
AAARQQEGVA AAGQPPPPQP TSSQLHHMIS ERRRRERLNE SFETLRRLEA QLGLVVPSRT  720
RQTASDDPSD TTTVQVDVTT GASTSTSTPT AGQPRTVAIR VTVRAECDLS ELVIVLLARI  780
KETGRFVVVT VDAEQRSSDH AQVSITLRTT VGDDGDLDET ALKEAVAKVV EEAVARPPSP  840
RRHGSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11433RRKGGSTRREESPWRHKRKR
2690695ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01093.1.g00070.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022681563.10.0putative transcription factor bHLH041
TrEMBLA0A3L6PIY51e-178A0A3L6PIY5_PANMI; Uncharacterized protein
STRINGSi007981m1e-173(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39773367